Available Bioinformatics Projects

The large variety of experiments performed at the chair requires tool, method and algorithm development in areas such as data visualization, machine learning and databases with applications ranging from basic research to clinical setups.

Below is a selection of projects we currently have on offer, but depending on your interests other projects are also be available. Please contact Matthew The for more information.

• Pathway visualization - BA, Internship
• Drug Protein Interaction - MA
• Flyability/Ionization prediction - BA, MA
• Spectra clustering on repository scale - MA
• PTM integration - BA, MA, Internship
• Decoy spectral libraries - MA
• Metaproteomics re-analysis - MA
• Inter-species comparison - MA
• LIMS triggered processing - BA, Internship
• Extending the QC pipeline - BA, Internship
• VueJS plotting components - BA, Internship
• Analytics for ProteomicsDB - BA, MA, Internship
• Match-between-runs in ProteomicsDB - MA
• Chemical proteomics app - MA