Online Workshop: Computational Proteomics

Free online workshop hosted by EPIC-XS

Welcome to a free online workshop organized by The European Proteomics Infrastructure Consortium providing access (EPIC-XS) on the topic of Computational Proteomics.

Please register here: EPIC-XS Online Workshop Registration



Thursday, 29th April 2021 15.50 – 18.00 CET

15.50 – 15.55     Open webinar, participants join

15.55 – 16.00     Welcome by Chairperson, Bernhard Kuster


Session 1:       16.00 – 17.00 Computational Proteomics of Protein Modifications

The first two talks feature speakers from the Heck lab at the University of Utrecht, The Netherlands (Richard Scheltema) and VIB-UGent Center for Medical Biotechnology, Gent, Belgium (Sven Degroeve and member of the EU Innovative computational proteomics training network PROTrEIN

 Chair: Bernhard Kuster (TUM)

16.00 – 16.25     Crosslinking mass spectrometry driven by XlinkX/PD, Richard Scheltema (UU)

16.25 – 16.50     Ionbot: a novel type of search engine to elucidate the modified proteome, Sven Degroeve (UGent)

16.50 – 17.00    Q&A moderated by Bernhard Kuster


Session 2:       17.00 – 18.00 Computational Proteomics for Protein Identification

The third and fourth talks are from the University of Applied Sciences Upper Austria (Viktoria Dorfer), and Technical University of Munich (Mathias Wilhelm), both are members of the EU Innovative computational proteomics training network PROTrEIN.

 Chair: Lennart Martens (VIB)

17.00 – 17.25     Peptide Identification using the MS Ana Spectra Library Search Engine, Viktoria Dorfer (University of Applied Sciences Upper Austria)

17.25 – 17.50     Prosit: Advancing mass spectrometry one spectrum at a time, Mathias Wilhelm (TUM)

17.50 – 18.00    Q&A with the 2 speakers, moderated by Lennart Martens


Please register here: EPIC-XS Online Workshop Registration

The Zoom meeting link will be sent to all registered participants a few days in advance. Note that while this workshop is a free online event, places are reserved for EPIC-XS members and affiliated groups. Once the maximum capacity has been reached, non-affiliated registrants will be contacted to inform them of their eligibility.

For information on upcoming EPIC-XS workshops in Computational, Clinical, Spatial, and Top-Down Proteomics and our workshop on Proteomics and Transcriptomics, check out the EPIC-XS event page.

This project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 823839.


Bernhard Küster
Mathias Wilhelm